[{"data":1,"prerenderedAt":111},["ShallowReactive",2],{"navigation":3,"/conferences/swat4hcls-2025-biohackathon":4,"/conferences/swat4hcls-2025-biohackathon-surround":102},[],{"id":5,"title":6,"body":7,"category":90,"date":91,"description":92,"extension":93,"location":94,"meta":95,"navigation":96,"path":97,"role":98,"seo":99,"stem":100,"url":92,"__hash__":101},"conferencesPost/conferences/20250227.swat4hcls-2025-biohackathon.md","SWAT4HCLS 2025 Biohackathon",{"type":8,"value":9,"toc":81},"minimark",[10,15,26,42,46,51,72],[11,12,14],"h2",{"id":13},"overview","Overview",[16,17,18,25],"p",{},[19,20,24],"a",{"href":21,"rel":22},"https://www.swat4ls.org",[23],"nofollow","Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS)"," is an annual conference at the intersection of semantic web technologies and biomedical research. Each year, the conference includes a dedicated Biohackathon track, a collaborative working session that runs in parallel with the main conference and continues with a dedicated full day afterwards.",[16,27,28,29,32,33,36,37,41],{},"I participated in the ",[30,31,6],"strong",{}," in ",[30,34,35],{},"Barcelona, Spain",", picking up a thread started at the ",[19,38,40],{"href":39},"/conferences/swat4hcls-2024-biohackathon","SWAT4HCLS 2024 Biohackathon"," on the use of a lightweight upper-level ontology for representing clinical concepts.",[11,43,45],{"id":44},"projects","Projects",[47,48,50],"h3",{"id":49},"applying-sulo-to-sphn-concepts","Applying SULO to SPHN Concepts",[16,52,53,54,59,60,65,66,71],{},"The ",[19,55,58],{"href":56,"rel":57},"https://github.com/AIDAVA-DEV/sulo",[23],"Simplified Upper Level Ontology (SULO)"," is a lightweight upper ontology that provides a minimal set of top-level categories and relations for representing clinical concepts. Rather than adopting a heavyweight foundational ontology such as ",[19,61,64],{"href":62,"rel":63},"https://github.com/BFO-ontology/BFO",[23],"BFO"," or ",[19,67,70],{"href":68,"rel":69},"https://www.loa.istc.cnr.it/dolce/overview.html",[23],"DOLCE"," in full, SULO offers a practical middle ground: preserving key ontological distinctions (such as between continuants and occurrents, or between material entities and information artifacts) in a tractable form that can be implemented directly in OWL, without burdening domain experts with excessive philosophical abstraction.",[16,73,74,75,80],{},"The project focused on applying SULO to a selection of SPHN concepts from the ",[19,76,79],{"href":77,"rel":78},"https://biomedit.ch/rdf/sphn-schema/sphn",[23],"SPHN RDF Schema"," to evaluate the feasibility and value of grounding SPHN's domain model within an upper ontology.",{"title":82,"searchDepth":83,"depth":83,"links":84},"",2,[85,86],{"id":13,"depth":83,"text":14},{"id":44,"depth":83,"text":45,"children":87},[88],{"id":49,"depth":89,"text":50},3,"Hackathon","2025-02-27",null,"md","SWAT4HCLS 2025, Barcelona, Spain",{},true,"/conferences/swat4hcls-2025-biohackathon","Collaborator",{"title":6,"description":92},"conferences/20250227.swat4hcls-2025-biohackathon","swM_Gs9fbg2FtBr0hMPuFoiEkZSz4LnOKuOjdLfncYs",[103,107],{"title":104,"path":105,"stem":106,"description":92,"children":-1},"Hands-on exploration of SPHN Semantic Interoperability Framework for FAIR knowledge graphs","/conferences/swat4hcls-tutorial-2025","conferences/20250224.swat4hcls-tutorial-2025",{"title":108,"path":109,"stem":110,"description":92,"children":-1},"The SPHN Metadata Catalog: A comprehensive tool for health data discovery and exploration based on FAIR principles","/conferences/mie-2025","conferences/20250520.mie-2025",1790836183525]